Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932901.1_cds_XP_016479348.1_70898
CDS Infomation

[gene=LOC107800648] [db_xref=GeneID:107800648] [protein=alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like] [protein_id=XP_016479348.1] [location=complement(6154..7761)] [gbkey=CDS]
Sequence

ATGGAGTGCGCTCTTGCATGTTCTGCTTCAGCAACAATTGCACTACTCAGCTGCCGCCAA
ATACGATGGGGAAAGACACGTTCAGCTAAGTTACCCAAGATTTGGAGCAGTTCGTGGCGT
TCTGGTAGCTCAAAGAGGAATAGGTCACTACACACTGTTGCCTTGAGTACCACCGCAGGA
TTCGGAAGCACCATGGAAGCTCCTGCTGCAGCCGATGCTCCACATCTTAATTATATGTGG
TCTGATAACAAGAGGCCAAGGGTCTGCATAGTAGGTGGTGGATTTGGTGGTCTTTATACA
GCACTGAGGTTAGAATCACTTGTTTGGCCTGATGACAAGAAACCACAGGTAGTCCTCATA
GACCAGTCAGAACGTTTCATTTTTAAGCCATTGTTGTATGAACTTCTCTCTGGAGAAGTT
GAGACATGGGAAATTGCTCCACAGTTCTCGGACTTGCTTGCCAATACCGACGTGCGGTTC
CTCAAAGACAGGGTAAAATGCCTATATCCATGTGACCATTTAGGAACTAATGCACCTACA
GCAGGGACTGTTCATCTCGAAAGCGGTCTCCTAATAGAATATGACTGGTTGGTCCTTGCT
ATAGGAGCTGAGGCCAAACTTGATATCGTACCAGGTGCTGCAGATTATGCCTTGCCATTT
TATACCCTAGAGGATGCTCTTAGGGTTGATAAAAAGCTAAGGGAATTAGAGCGCGAGAAC
TTTGGTAAGGACTCTGCAATACGAGTAGCGGTGGTTGGATGTGGTTATGGCGGAGTGGAA
TTAGCTGCCACGATATCAGAAAGGTTGCAAGAAAAGGGAATTGTACAAGCAATTAATGTT
GAAAAGACAGTCTTACCAAATGCTCCGGCAGGAAATAGGGAAGCAGCACTAAAAGTACTT
TTGTCCAGGAAAGTTCAACTTCTACTTGGTTATTTTGTCCGGTGCATAAAACAAGGAGTC
GAGTATCAGACCTCTGATACTGAATCTAAAAGTACGGACTCAGCAGCTGATCATTCTGAG
AGTGTAATACTTGAATTGCAGCCTGCTGAAAGGGGGTTAGAGGGTCAGATCATAACTGCA
GATATAGTTTTATGGACTATTGGATCTAAGCCACTACTTCCTGAGTTGGAACCTAGTGAT
AAACCTTACAACATTCCTCTGAATGTTAGGGGACAAGCAGAAACTGATGAAACTCTCCGT
GTCAAGGGTCATCCTCGTATATTTGCTGTTGGTGACTCTTCTGCGTTAAGGGACGAAAAT
GGGAAGGTGCTACCGGCTACTGCACAAGTTGCTTTCCAGCAAGCAGATTTTGCTGGTTGG
AATTTGTGGGCCGCAATTAATGACCGTCCACTGTTGCCTTTTAGATATCAAAATTTAGGT
GAGATGATGACCCTTGGCAGGTGTGATGCTGCTGTTTCACCAAGTTTCACTGATGGGCTG
ACCTTGGAAGGTTTTGTTGGTCATACTGCAAGAAAAATAGCTTATTTGATCAGATTACCA
ACAGATAAGCACCGAGTGAAAGTAGGAATCAGTTGGTTACTGAAGTCCACGGTGGATTCT
GTTGCAACAGTACAGACAATGCTCGCTAAAGCTCAATCAGGATCTTAG

Peptide Sequence

PEP ID

XP_016479348.1
PEP Infomation

PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MECALACSASATIALLSCRQIRWGKTRSAKLPKIWSSSWRSGSSKRNRSLHTVALSTTAG
FGSTMEAPAAADAPHLNYMWSDNKRPRVCIVGGGFGGLYTALRLESLVWPDDKKPQVVLI
DQSERFIFKPLLYELLSGEVETWEIAPQFSDLLANTDVRFLKDRVKCLYPCDHLGTNAPT
AGTVHLESGLLIEYDWLVLAIGAEAKLDIVPGAADYALPFYTLEDALRVDKKLRELEREN
FGKDSAIRVAVVGCGYGGVELAATISERLQEKGIVQAINVEKTVLPNAPAGNREAALKVL
LSRKVQLLLGYFVRCIKQGVEYQTSDTESKSTDSAADHSESVILELQPAERGLEGQIITA
DIVLWTIGSKPLLPELEPSDKPYNIPLNVRGQAETDETLRVKGHPRIFAVGDSSALRDEN
GKVLPATAQVAFQQADFAGWNLWAAINDRPLLPFRYQNLGEMMTLGRCDAAVSPSFTDGL
TLEGFVGHTARKIAYLIRLPTDKHRVKVGISWLLKSTVDSVATVQTMLAKAQSGS

Transcript Sequence

Gene sequence data has not been registered.